W0202
SAD Phasing Using Sulfur Anomalous Scattering with Chromium
Radiation. C. Yang, J.W. Pflugrath, C.N. Stence, D.A. Courville, J.D.
Ferrara*, Rigaku/MSC, Inc. 9009 New Trails Dr., The Woodlands, TX
77381.
Anomalous scattering with soft X-ray radiation opens new
possibilities in phasing for macromolecular crystallography. Anomalous
scattering from sulfur atoms collected on an in-house chromium radiation (2.29
Å) source was used to phase the X-ray diffraction data of thaumatin (22
kDa), trypsin (24 kDa) and glucose isomerase (40 kDa) crystals. The contribution
to the anomalous term, Δƒ”=1.14 °, from sulfur for
CrKα radiation is double compared to
that for CuKα radiation,
Δƒ”=0.56°. The direct methods program SHELXD successfully
found sulfur positions using data sets with the resolution limited to 3.5
Å. The statistical phasing program SHARP was used to produce the electron
density maps using the sulfur anomalous signal alone at a low resolution (~3.5
Å). An interpretable electron density map for each structure was obtained
solely from these phases derived from single-wavelength anomalous dispersion
(SAD) data from CrKα radiation. Much
less data, that is lower redundancy, is required for this sulfur SAD phasing
procedure compared to the highly redundant data reported in the sulfur SAD
phasing procedure with CuKα
radiation. CrKα
radiation can also improve the strength of anomalous scattering of
many other intrinsic elements in macromolecules, like Ca2+,
Zn2+, and P, because of the doubled value of Δƒ”.
Furthermore, the anomalous scattering of selenium is increased substantially
when CrKα radiation is used, because
its Δƒ” is increased to 2.28° from 1.14° with
CuKα radiation.
In order to measure small Bijvoet differences accurately,
several devices were developed for the experiment, including an Osmic Confocal
MaxFlux optic optimized for CrKα
radiation, a helium path and a beam stop. In the cases studied
here, radiation damage to the samples and reduction of anomalous signal were
observed in some long data sets. Therefore, an adequate collection strategy to
maximize the completeness in a short scan range was used in subsequent data
collections. The results show the anomalous signal of sulfur atoms can be
quickly collected. Since the absorption of solvent and the loop with
CrKα radiation may not be negligible
any more, the orientation of the crystal and exposure time were accounted for in
order to minimize the effects of radiation damage and absorption. This
experimental study shows using CrKα
radiation can provide sufficient phasing power from sulfur
anomalous signals for routinely phasing protein data in-house.