W0290
32-kDa Protein Structure (One Se Site) Solved by using SAD
Data Collected at the Structural Biology Center. R. Zhang, F.J. Rotella,
R.W. Alkire, N.E.C. Duke, M. Zhou, G. Joachimiak and A. Joachimiak, Biosciences
Div., Argonne National Laboratory, Argonne, IL 60439.
Insertion-device beamlines at third-generation synchrotron
sources, such as Argonne’s Advanced Photon Source (APS), have expanded the
capabilities of protein crystallography to include atomic- and
near-atomic-resolution data collection, with the ability to collect complete
data sets in a matter of minutes. Single-wavelength anomalous diffraction (SAD)
experiments under these conditions can be completed in times ranging from
minutes to an hour. Due to the properties of the anomalous signal, these
experiments are capable of yielding unbiased phases and experimental electron
density maps at atomic resolution. X-ray diffraction data from a crystalline
hypothetical protein from Staphylococcus aureus were collected using the
insertion-device beamline (19ID) and experiment facilities of the Structural
Biology Center at the APS. SAD data were collected at the peak wavelength of the
Se K-edge in 15 minutes employing inverse-beam geometry for the orthorhombic
sample (P212121, a = 40.50 Å, b = 73.88
Å, c = 92.25 Å, Z = 1, MW = 32 kDa). The data set covered a rotation
range of 280° in 1° images with a 2-second exposure time per image.
Diffraction from the sample was observed to a resolution of 1.7 Å. The
images were processed using HKL2000.1 The structure was phased from
one Se site, and it was solved and refined using CNS.2 Further
details of data collection, structure solution and structure refinement will be
presented.
1Otwinowski, Z. and Minor, W. (1997). Methods
Enzymol. 276, 307–326.
2Brünger, A. T., et al. (1998). Acta
Crystallogr. D 54, 905–921.
This work was supported by the National Institutes of Health
Grant GM62414-01 and the U. S. Department of Energy, Office of Biological and
Environmental Research, under Contract W-31-109-ENG-38.
The submitted manuscript has been created by the
University of Chicago as Operator of Argonne National Laboratory
(“Argonne”) under Contract No. W-31-109-ENG-38 with the U.S.
Department of Energy. The U.S. Government retains for itself, and others acting
on its behalf, a paid-up, nonexclusive, irrevocable worldwide license in said
article to reproduce, prepare derivative works, distribute copies to the public,
and perform publicly and display publicly, by or on behalf of the Government.